BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017C09SP1|AL427140
(1008 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1929 0.0
>3x_Contig1461
Length = 5478
Score = 1929 bits (970), Expect = 0.0
Identities = 995/1006 (98%), Gaps = 1/1006 (0%)
Strand = Plus / Plus
Query: 4 acctagaaactctctccaccgcgagacgaggccatagtctgttcgacgaacgactacatc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2558 acctagaaactctctccaccgcgagacgaggccatagtctgttcgacgaacgactacatc 2617
Query: 64 caaatcttactcaagtttgtttccaaactctttccgattcgtcttcaactgctttcgcat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2618 caaatcttactcaagtttgtttccaaactctttccgattcgtcttcaactgctttcgcat 2677
Query: 124 gaagtacctcccggcctatttttctcacccgtggtcttctttctattagccctcacgtt- 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2678 gaagtacctcccggcctatttttctcacccgtggtcttctttctattagccctcacgttt 2737
Query: 183 ctatatttcaaaaatgcattcatttttttcatcttctcaataccctctgttatttttttc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2738 ctatatttcaaaaatgcattcatttttttcatcttctcaataccctctgttatttttttc 2797
Query: 243 agtattttttcaaatggtaaaattcgcacttttagctttttttcttccccttctttttca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2798 agtattttttcaaatggtaaaattcgcacttttagctttttttcttccccttctttttca 2857
Query: 303 tcaacgattctcccctttatatacaaatctcgattttcgtttttgtgtttccctttttat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2858 tcaacgattctcccctttatatacaaatctcgattttcgtttttgtgtttccctttttat 2917
Query: 363 tttttcactcctgttaaggaggataatcccactggttgagaagaaaataaaaaaaacaaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2918 tttttcactcctgttaaggaggataatcccactggttgagaagaaaataaaaaaaacaaa 2977
Query: 423 taaaaaaaatacagatggtgattcatctggcactctctcctttcagacctaaaattcaac 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2978 taaaaaaaatacagatggtgattcatctggcactctctcctttcagacctaaaattcaac 3037
Query: 483 actgttctgccacattattccttgcatgaaataagagcagcagcattacaacatgagcka 542
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3038 actgttctgccacattattccttgcatgaaataagagcagcagcattacaacatgagcta 3097
Query: 543 ctgtacatctacacgagcagtattatkcttcttcgttttgacataataataatkgtgtta 602
|||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 3098 ctgtacatctacacgagcagtattattcttcttcgttttgacataataataattgtttta 3157
Query: 603 gatcccagagatagtgcttcaatcgaagtagtctctagaattgcattgctccctgttcgt 662
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3158 gatcccagagatagttcttcaatcgaagtagtctctagaattgcattgctccctgttcgt 3217
Query: 663 tttttgtatcttgtttccatatcatgcatctktctacactgtntgactnatatgtcatgt 722
||||||||||||||||||||||||||||||| |||||||||| ||||| |||| ||||||
Sbjct: 3218 tttttgtatcttgtttccatatcatgcatctttctacactgtttgacttatatttcatgt 3277
Query: 723 acttaaccctaaattctcttcatttgtaattgttttttatcccaaccactaaatggatgt 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3278 acttaaccctaaattctcttcatttgtaattgttttttatcccaaccactaaatggatgt 3337
Query: 783 atttgaggattcatccttctagaacatatcacaacttttaaggtgtaaatgttaaattgc 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3338 atttgaggattcatccttctagaacatatcacaacttttaaggtgtaaatgttaaattgc 3397
Query: 843 atttcaaataagtcatttcattaatgatacgttcgcatatcatcacacagtttaggaaca 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3398 atttcaaataagtcatttcattaatgatacgttcgcatatcatcacacagtttaggaaca 3457
Query: 903 cattatcactgttcccgctgctttattcaatttatcatcgaagtatctttctcttttcta 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3458 cattatcactgttcccgctgctttattcaatttatcatcgaagtatctttctcttttcta 3517
Query: 963 tatctgattttyagtttttgcatgtttttcaaagtattgggagatc 1008
||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3518 tatctgatttttagtttttgcatgtttttcaaagtattgggagatc 3563
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,283
Number of Sequences: 1807
Number of extensions: 11283
Number of successful extensions: 168
Number of sequences better than 1.0e-20: 1
length of query: 1008
length of database: 10,358,551
effective HSP length: 16
effective length of query: 992
effective length of database: 10,329,639
effective search space: 10247001888
effective search space used: 10247001888
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)